Methods for detecting methylation by SNP interaction in GAW20 simulation

BMC Proceedings

Table 1 Heritability estimates of trait Post (using SOLAR)

Trait/Marker(s)	Mean	Median	Standard Deviation	Software
Post [average of log (TG3) and log (TG4)]	0.4307	0.4313	0.0509	SOLAR
rs9661059	0.0210	0.0210	0.0050	b² regression (SAS) from standardized dosage and standardized phenotype
rs736004	0.0008	0.0005	0.0008	-″-
rs1012116	0.0070	0.0070	0.0030	-″-
rs10828412	0.0004	0.0002	0.0005	-″-
rs4399565	0.0090	0.0080	0.0030	-″-
100 background SNPs	0.0024	0.0011	0.0032	b² regression (SAS) from standardized dosage and standardized phenotype

Five main SNPs (β² of a regression of standardized residuals on standardized dosage for each marker) and 100 background SNPs evaluated at 200 replications

ISSN: 1753-6561