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Table 1 p Values of 5 answers and 5 noises by the W-test and the logistic regression models LR-m1 and LR-m2 in simulated data

From: Gene-methylation epistatic analyses via the W-test identifies enriched signals of neuronal genes in patients undergoing lipid-control treatment

 

No

Marker information

p Value

CpG

SNP

Heritability

Chr

W-test

LR-m1

LR-m2

Answer

1

cg00000363

rs9661059

0.125

1

4.93E − 5

1.88E − 4

2.37E − 5

2

cg10480950

rs736004

0.075

6

6.61E − 4

2.17E − 3

3.72E − 4

3

cg18772399

rs1012116

0.1

8

7.67E − 4

2.04E − 4

8.24E − 4

4

cg00045910

rs10828412

0.025

10

4.75E − 2

5.32E − 2

5.97E − 2

5

cg01242676

rs4399565

0.05

17

3.76E − 1

6.33E − 1

4.95E − 1

Noise

6

cg00703276

rs2953763

3

5.11E − 1

1.84E − 1

1.32E − 1

7

cg01971676

rs6960763

7

6.30E − 1

6.72E − 1

4.19E − 1

8

cg11736230

rs2494731

14

1.61E − 1

2.06E − 1

1.10E − 1

9

cg00001261

rs4786421

16

4.18E − 1

1.46E − 1

5.56E − 1

10

cg12598270

rs323312

18

7.33E − 1

8.03E − 1

4.19E − 1