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Table 2 Mean (SD) significance levels (-log10(p)) for each design for fraction of samples f in stage one and for sample sizes 100, 200 and 300 for each method

From: Marker selection for whole-genome association studies with two-stage designs using dense single-nucleotide polymorphisms

  100 200 300
f 1 stage 2 stage 2 stage-c 1 stage 2 stage 2 stage-c 1 stage 2 stage 2 stage-c
0.3   10.8(± 0.29) 11.0(± 0.30)   25.1(± 0.40) 25.3(± 0.41)   39.7(± 0.47) 39.9(± 0.49)
0.4 11.6(± 0.30) 10.7(± 0.29) 11.0(± 0.30) 26.1(± 0.40) 25.1(± 0.40) 25.4(± 0.40) 40.8(± 0.47) 39.7(± 0.47) 40.1(± 0.47)
0.5   10.8(± 0.30) 11.1(± 0.30)   25.2(± 0.40) 25.5(± 0.40)   39.7(± 0.47) 40.1(± 0.47)