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Table 1 Characteristics of the SNPs selected to test association to HDL and TG

From: A comparative study of three methods for detecting association of quantitative traits in samples of related subjects

       

h 2 g

Chr

Gene

Position (bp)

SNP

MAF (%)

Symbol

D' (functional variant)a

HDL

TG

7

None

24,734,008

rs2521760

12.7

-

-

-

-

8

 

19,794,163

rs17091651

10.0

-

0.04 (α4)

-

-

 

LPL

       
  

19,868,351

rs3200218

21.7

α4

 

0.3%

0.4%

  

19,943,326

rs4244457

32.9

-

0.04 (α4)

-

-

19

 

46,010,146

rs11083567

18.2

-

0.07 (α2) - 0.03 (δ1)

-

-

 

CYP2B7P1

46,089,501

rs8103444

24.4

α2

0.003 (δ1)

0.2%

 
 

CYP2B6

46,210,613

rs8192719

24.9

δ1

0.003 (α2)

0.3%

0.3%

  

46,335,684

rs1631931

13.5

-

0.01 (α2) - 0.03 (δ1)

-

-

  1. aPairwise linkage disequilibrium coefficient (D'/Dmax) between the functional variant (symbol) and the SNPs in its vicinity (<200 kb)
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BMC Proceedings

ISSN: 1753-6561

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