From: Gene hunting of the Genetic Analysis Workshop 16 rheumatoid arthritis data using rough set theory
Chr. | Gene symbola | No. SNPsb | SCc | No clusteringd | MI clustering | AS clustering | |||
---|---|---|---|---|---|---|---|---|---|
 |  |  |  | p-value | dfe | p-valuef | dfe | p-valuef | dfe |
16 | C16orf57 | 2/2 | 1 | 6.06 × 10-8 | 5 | 6.06 × 10-8 (1) | 5 | 1.65 × 10-2 (10) | 3 |
21 | KRTAP10-6 | 2/2 | 1 | 8.06 × 10-6 | 6 | 8.06 × 10-6 (2) | 6 | 4.42 × 10-7 (1) | 3 |
19 | DEDD2 | 3/3 | 1 | 3.29 × 10-5 | 12 | 3.35 × 10-3 (9) | 2 | 1.84 × 10-6 (2) | 6 |
9 | AGPAT2 | 4/4 | 1 | 4.57 × 10 -5 | 30 | 4.57 × 10 -5 (4) | 5 | 3.30 × 10 -3 (9) | 18 |
9 | TRAF1 | 3/3 | 1 | 7.35 × 10 -5 | 11 | 5.90 × 10 -5 (6) | 2 | 8.91 × 10 -6 (6) | 6 |
15 | ODF3L1 | 4/4 | 1 | 1.00 × 10-4 | 29 | 1.00 × 10-4 (7) | 29 | 1.89 × 10-6 (3) | 17 |
19 | RSHL1 | 3/3 | 1 | 1.02 × 10-4 | 12 | 1.53 × 10-3 (8) | 1 | 1.09 × 10-3 (8) | 6 |
11 | CDC42BPG | 3/3 | 1 | 1.04 × 10-4 | 12 | 7.95 × 10-1 (10) | 1 | 2.55 × 10-6 (4) | 6 |
1 | ADAM15 | 7/7 | 1 | 1.08 × 10 -4 | 64 | 5.62 × 10 -5 (5) | 49 | 2.05 × 10 -5 (7) | 40 |
1 | PTPN22 | 6/7 | 0.5 | 1.24 × 10 -4 | 34 | 1.52 × 10 -5 (3) | 27 | 3.58 × 10 -6 (5) | 20 |