Table 4 The two-variable interactions with KWII values ≥ 95th percentile (0.01) obtained using SNPs on gene × gene pairs on Data Set 1
From: A two-stage search strategy for detecting multiple loci associated with rheumatoid arthritis
SNP1-SNP2 | Gene/genome region 1 - Gene/genome region 2 | KWII | p-Valuea |
|---|---|---|---|
rs9275596-rs1542876 | 6p21.3-RUNX1 | 0.01914 | 2.05 × 10-6 |
rs2856725-rs1542876 | 6p21.3-RUNX1 | 0.01743 | 3.61 × 10-5 |
rs9275596-rs1041778 | 6p21.3-RUNX1 | 0.01471 | 8.25 × 10-7 |
rs7770216-rs563495 | 6p21.3-6q23 | 0.01444 | 4.15 × 10-7 |
rs7755852-rs2745443 | 6p21.3-6q23 | 0.01275 | 6.22 × 10-7 |
rs9275698-rs1883468 | 6p21.3-6q23 | 0.01262 | 4.51 × 10-7 |
rs4673260-rs12190331 | CTLA4-6q23 | 0.01385 | 7.86 × 10-8 |
rs1206684-rs651084 | 6q23-RUNX1 | 0.01261 | 6.12 × 10-5 |
rs2844729-rs16984549 | 6p21.3-RUNX1 | 0.01255 | 5.71 × 10-7 |
rs2856725-rs1041778 | 6p21.3-RUNX1 | 0.01247 | 6.54 × 10-6 |