BMC Proceedings

Table 2 Selected interactions by different proposed procedures (p-value < 0.01)

From: Rheumatoid arthritis-associated gene-gene interaction network for rheumatoid arthritis candidate genes

Curve method			Rank method
Mean Ratio	90% Quantile	95% Quantile	Mean Ratio	90% Quantile	95% Quantile
IL3 BTLA	IL3 BTLA	IL3 BTLA	IL3 BTLA	IL3 MIF ^a	IL3 BTLA
IL3 MIF	IL3 MIF	IL3 MIF	IL3 MIF	IL3 PADI4	IL3 MIF
IL3 PADI4	IL3 PADI4	IL3 PADI4	IL3 PADI4	IL3 TRAF1-C5 ^a	IL3 PADI4
IL3 SLC22A4	IL3 TRAF1-C5	IL3 TRAF1-C5	IL3 SLC22A4	ITGAV VEGF	MIF BTLA
IL3 TNFRSF1B	MIF BTLA	MIF BTLA	IL3 TNFRSF1B	MIF BTLA ^a	MIF FCGR3A
IL3 TRAF1-C5	MIF FCGR3A		IL3 TRAF1-C5	MIF FCGR3A ^a	MIF TRAF1-C5
MIF BTLA	MIF TRAF1-C5		MIF BTLA	MIF TRAF1-C5 ^a
MIF FCGR3A	FCGR3A		MIF FCGR3A
MIF ITGAV	TRAF1-C5 ^a		MIF HLA-B ^a
MIF TRAF1-C5			MIF ITGAV
MIF CTLA4 ^a			MIF TNFRSF1B ^a
			MIF TRAF1-C5
			MIF VEGF
			NFKBIL1 HLA-B ^a
			NFKBIL1 VEGF
			NFKBIL1 TNF
			VEGF IL6 ^a
			VEGF HLA-B ^a
			HLA-A HLA-B ^a
			HLA-B HLA-C ^a

^a Significant interactions only identified in Gene Set II

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ISSN: 1753-6561

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