Table 1 The details of the ncRNA families used in the experiments.
From: Local structural alignment of RNA with affine gap model
Family | Query Sequence ID | Length | Number of members embedded |
|---|---|---|---|
RF00014 | CP000468.1/2032552-2032638 | 87 | 96 |
RF00021 | CP000851.1/113395-113522 | 128 | 100 |
RF00022 | AAND01000021.1/495-707 | 213 | 100 |
RF00027 | AAPE01289140.1/8905-8994 | 90 | 100 |
RF00032 | S49118.1/1081-1106 | 26 | 100 |
RF00033 | Y15844.1/450-543 | 94 | 100 |
RF00034 | BX571867.1/288515-288628 | 114 | 100 |
RF00038 | AJ132964.1/66-198 | 133 | 100 |
RF00039 | AF370716.1/3603-3656 | 54 | 100 |
RF00042 | X55895.1/474-565 | 92 | 100 |
RF00043 | Z47410.1/1220-1294 | 75 | 21 |
RF00044 | M11813.1/4883-5126 | 244 | 8 |
RF00046 | AY013245.2/62208-62303 | 96 | 76 |
RF00048 | AF504534.1/666-726 | 61 | 100 |
RF00386 | AF363455.1/1-122 | 122 | 100 |
RF00643 | AASG02000279.1/67999-67862 | 138 | 100 |
RF00661 | AC154049.1/4734-4855 | 122 | 100 |
RF01051 | AE014299.1/1112481-1112574 | 94 | 100 |