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Table 3 Number of haplotypes according to chromosome, haplotype length and frequency

From: Linear models for breeding values prediction in haplotype-assisted selection - an analysis of QTL-MAS Workshop 2011 Data

Haplotype length

subset

chromosome

TOTAL

  

1

2

3

4

5

 

all

all

328

309

240

262

337

1476

 

freq>1%

184

172

131

146

184

817

2

all

232

215

173

187

235

1042

 

freq>1%

150

134

104

114

142

644

3

all

56

70

35

49

44

254

 

freq>1%

24

30

17

24

28

123

4

all

18

14

16

26

24

98

 

freq>1%

6

6

6

8

8

34

5

all

8

-

16

-

22

46

 

freq>1%

2

-

4

-

4

10

6

all

-

-

-

-

12

12

 

freq>1%

-

-

-

-

2

2

7

all

-

10

-

-

-

10

 

freq>1%

-

2

-

-

-

2

8

all

14

-

-

-

-

14

 

freq>1%

2

-

-

-

-

2

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BMC Proceedings

ISSN: 1753-6561

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