Table 4 Proportion of phenotypic variance of log(SBP) (averaged over 500 replicates, ± SD) explained by simultaneous regression on nongenetic covariates and on sets of equal size (500 markers), defined according to functional annotation and MAF
From: Estimating proportions of explained variance: a comparison of whole genome subsets
Functionality region | All frequencies | Allele frequency | ||
|---|---|---|---|---|
| Â | Â | Common | Rare | Very rare |
All regions | 0.233 ± 0.054 | 0.234 ± 0.053 | 0.252 ± 0.052 | 0.250 ± 0.063 |
Genic | 0.241 ± 0.053 | 0.244 ± 0.053 | 0.253 ± 0.052 | 0.250 ± 0.063 |
Flanking | 0.227 ± 0.055 | 0.227 ± 0.054 | 0.244 ± 0.053 | 0.246 ± 0.060 |