Figure 2
Comparison of −log 10 p values at each SNP calculated using different methods. The upper triangles show the values based on mean residuals, while the lower triangles show the values calculated using longitudinal data. DBP, diastolic blood pressure; EM_BN, EMMAX using Balding-Nichols matrix; EM_IBS, EMMAX using IBS matrix; FLM_C, FaST-LMM using standard covariance matrix; FLM_R, FaST-LMM using realized relationship matrix; GA_FA, GenABEL/FASTA; GA_GRG, GenABEL/GRAMMAR-Gamma; GMA_C, Gemma using centralized covariance matrix; GMA_S, Gemma using standardized covariance matrix; SBP, systolic blood pressure.