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Table 5 Genetic correlations with and without fitting identified SNPs with the different association analyses as fixed effects.

From: Genome wide association analysis of the QTL MAS 2012 data investigating pleiotropy

 

trait 1/trait 2

trait 1/trait 3

trait 2/trait 3

Single trait analysis*

0.79

-0.36

0.08

PC1

0.81

-0.46

0.13

PC2

0.86

-0.45

0.03

Bayesian multivariate

0.81

-0.46

0.08

  1. * Only significant associated SNPs of the particular traits were implemented as fixed effects in the polygenic model.