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Table 2 Distribution of domains for synthetic RNA with two domains

From: Characteristics of equipartition for RNA structure

sequences

L

H1

H2

D1

D2

R 1

R2

sequences

L

H1

H2

D1

D2

R 1

R2

PDB_00483

58

1-29

30-58

1-29

30-58

0.5

1.0

PDB_00123

92

1-46

49-92

1-46

47-92

0.5

1.0

PDB_00816

46

1-23

24-46

1-23

24-46

0.5

1.0

PDB_00196

57

1-18

20-57

1-19

20-57

0.33

1.0

PDB_00924

86

1-43

44-86

1-43

44-86

0.5

1.0

PDB_00236

48

1-24

25-48

1-24

25-48

0.5

1.0

PDB_00942

31

1-15

17-31

1-15

16-31

0.48

1.0

PDB_00254

24

1-12

13-24

1-12

13-24

0.5

1.0

PDB_00963

28

1-15

16-28

1-15

16-28

0.54

1.0

PDB_00264

48

1-24

26-48

1-24

25-48

0.5

1.0

PDB_00964

36

1-19

22-34

1-19

20-36

0.53

1.0

PDB_00709

40

1-16

17-32

1-16

17-40

0.4

1.0

PDB_00965

21

2-10

13-21

1-11

12-21

0.52

1.0

PDB_00710

40

1-16

17-32

1-16

17-40

0.4

1.0

PDB_00966

23

2-10

13-23

1-12

13-23

0.52

1.0

PDB_00868

52

1-19

21-39

1-20

21-52

0.39

1.0

PDB_00970

34

1-17

20-32

1-17

18-34

0.5

1.0

PDB_00663

44

2-19

26-41

1-22

23-44

0.5

1.0

PDB_00971

30

1-17

18-30

1-17

18-30

0.57

1.0

PDB_00682

32

1-16

17-32

1-16

17-32

0.5

1.0

PDB_00973

27

2-14

15-27

1-14

15-27

0.52

1.0

PDB_00688

40

1-20

21-40

1-20

21-40

0.5

1.0

PDB_00974

28

1-15

16-28

1-15

16-28

0.54

1.0

PDB_00724

66

1-32

34-65

1-33

34-66

0.5

1.0

PDB_00979

154

3-77

80-154

1-77

78-154

0.5

1.0

PDB_00866

19

2-9

11-19

1-10

11-19

0.53

1.0

PDB_01035

56

1-26

27-56

1-26

27-56

0.46

1.0

PDB_00871

48

1-24

25-48

1-24

25-48

0.5

1.0

PDB_01130

60

1-30

31-60

1-30

31-60

0.5

1.0

PDB_00874

44

1-20

23-42

1-22

23-44

0.5

1.0

PDB_01135

29

1-15

17-29

1-15

17-29

0.52

1.0

PDB_00886

92

1-46

47-92

1-46

47-92

0.5

1.0

PDB_01136

30

2-14

17-29

2-14

15-29

0.5

1.0

PDB_00892

72

1-36

48-61

1-36

37-72

0.5

1.0

PDB_01138

26

1-15

18-25

1-15

16-26

0.58

1.0

PDB_00929

40

1-20

21-40

1-20

21-40

0.5

1.0

PDB_01145

40

1-20

21-40

1-20

21-40

0.5

1.0

PDB_00960

29

2-13

18-29

2-15

16-29

0.52

1.0

PDB_01164

56

1-26

27-56

1-26

27-56

0.46

1.0

PDB_01017

30

2-15

17-30

2-15

16-30

0.5

1.0

NDB_00010

8

1-4

5-8

1-4

5-8

0.5

1.0

PDB_01019

30

2-15

17-30

2-15

16-30

0.5

1.0

NDB_00037

8

1-4

5-8

1-4

5-8

0.5

1.0

PDB_01156

88

1-43

45-87

1-44

45-88

0.5

1.0

NDB_00048

56

1-28

29-56

1-28

29-56

0.5

1.0

PDB_01219

44

1-21

23-44

1-22

23-44

0.5

1.0

PDB_00104

36

1-18

19-36

1-18

19-36

0.5

1.0

PDB_00945

31

2-14

15-30

1-14

15-31

0.48

1.0

  1. L is the length of the sequence, H1-H2 are the helixes of the sequence, D1-D2 are the domains of the sequence, R1-R2 are the ratios of 3'-end of domains to the length of sequence. The helix data is the closed base pair in helix or the start and end bases in pseudokont. The domain is expressed as 5'-end and 3'-end.