Characteristics of equipartition for RNA structure

BMC Proceedings

Table 6 Distribution of domains for Other RNA, Viral Phage and Ham Ribozyme with multiple domains

Sequence ID	Type	L	N	D1	D2	D3	D4	R1	R2	R3	R4
PDB_00308	Other RNA	150	2	1-75	76-150			0.5	1.0
PDB_00358	Other RNA	146	2	1-73	74-146			0.5	1.0
PDB_00419	Other RNA	150	2	1-75	76-150			0.5	1.0
PDB_00804	Other RNA	176	2	1-88	89-176			0.5	1.0
PDB_00967	Other RNA	156	2	1-78	79-156			0.5	1.0
PDB_00983	Other RNA	152	2	1-75	76-152			0.5	1.0
PDB_01274	Other RNA	152	2	1-76	77-152			0.5	1.0
PDB_00626	Other RNA	225	3	1-75	76-150	151-225		0.33	0.67	1.0
PDB_00739	Other RNA	228	3	1-76	77-152	153-228		0.33	0.67	1.0
PDB_01261	Other RNA	968	3	1-484	485-726	727-968		0.5	0.75	1.0
PDB_00985	Other RNA	248	4	1-62	63-124	125-186	187-248	0.25	0.5	0.75	1.0
PDB_01161	Other RNA	272	4	1-72	73-144	145-210	211-272	0.26	0.52	0.77	1.0
PDB_00743	Viral Phage	33	2	1-17	18-33			0.52	1.0
PDB_00157	Ham. Ribozyme	82	2	3-39	44-80	1-41	42-82	0.5	1.0

L is the length of the sequence, N is the number of domain in the sequence, D1-D4 are the domains of the sequence, R1-R4 are the ratios of 3'-end of domains to the length of sequence. The domain is expressed as 5'-end and 3'-end.

ISSN: 1753-6561