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Volume 5 Supplement 2

Selected Proceedings of the 6th International Symposium on Bioinformatics Research and Applications (ISBRA;10)

Proceedings

Edited by Ion Mandoiu, J Peter Gogarten and Alex Zelikovsky

6th International Symposium on Bioinformatics Research and Applications (ISBRA;10). Go to conference site.

Storrs, CT, USA23-26 May 2010

  1. Plants have played a special role in inositol polyphosphate (IP) research since in plant seeds was discovered the first IP, the fully phosphorylated inositol ring of phytic acid (IP6). It is now known that phy...

    Authors: Fabio Fassetti, Ofelia Leone, Luigi Palopoli, Simona E Rombo and Adolfo Saiardi
    Citation: BMC Proceedings 2011 5(Suppl 2):S1
    Content type: Proceedings Published on:

  2. Predicting new non-coding RNAs (ncRNAs) of a family can be done by aligning the potential candidate with a member of the family with known sequence and secondary structure. Existing tools either only consider ...

    Authors: Thomas King-Fung Wong, Brenda Wing-Yan Cheung, Tak-Wah Lam and Siu-Ming Yiu
    Citation: BMC Proceedings 2011 5(Suppl 2):S2
    Content type: Proceedings Published on:

  3. The gene networks underlying closure of the optic fissure during vertebrate eye development are not well-understood. We use a novel clustering method based on nonlinear dimension reduction with data labeling t...

    Authors: Martin Ehler, Vinodh N Rajapakse, Barry R Zeeberg, Brian P Brooks, Jacob Brown, Wojciech Czaja and Robert F Bonner
    Citation: BMC Proceedings 2011 5(Suppl 2):S3
    Content type: Proceedings Published on:

  5. A popular model for gene regulatory networks is the Boolean network model. In this paper, we propose an algorithm to perform an analysis of gene regulatory interactions using the Boolean network model and time...

    Authors: Carlos HA Higa, Vitor HP Louzada, Tales P Andrade and Ronaldo F Hashimoto
    Citation: BMC Proceedings 2011 5(Suppl 2):S5
    Content type: Proceedings Published on:

  6. Genetic disease studies investigate relationships between changes in chromosomes and genetic diseases. Single haplotypes provide useful information for these studies but extracting single haplotypes directly b...

    Authors: Duong D Doan and Patricia A Evans
    Citation: BMC Proceedings 2011 5(Suppl 2):S6
    Content type: Proceedings Published on:

  7. Many genome projects were underway before the advent of high-throughput sequencing and have thus been supported by a wealth of genome information from other technologies. Such information frequently takes the ...

    Authors: Thomas N Heider, James Lindsay, Chenwei Wang, Rachel J O’Neill and Andrew J Pask
    Citation: BMC Proceedings 2011 5(Suppl 2):S7
    Content type: Proceedings Published on:

  8. The binding events of DNA-interacting proteins and their patterns can be extensively characterized by high density ChIP-chip tiling array data. The characteristics of the binding events could be different for ...

    Authors: Juntao Li, Lei Zhu, Majid Eshaghi, Jianhua Liu and Krishna Murthy R Karuturi
    Citation: BMC Proceedings 2011 5(Suppl 2):S8
    Content type: Proceedings Published on:

  10. In principle, gene expression data can be viewed as providing just the three-valued expression profiles of target biological elements relative to an experiment at hand. Although complicated, gathering expressi...

    Authors: Hasan Jamil and Aminul Islam
    Citation: BMC Proceedings 2011 5(Suppl 2):S10
    Content type: Proceedings Published on:

  11. The assignment of DNA samples to coarse population groups can be a useful but difficult task. One such example is the inference of coarse ethnic groupings for forensic applications. Ethnicity plays an importan...

    Authors: Chih Lee, Ion I Măndoiu and Craig E Nelson
    Citation: BMC Proceedings 2011 5(Suppl 2):S11
    Content type: Proceedings Published on:

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